It's been several years since the Great Unison and the Lunar Uprising. Equestrian society, under the rule of Luna and Artemis, has been moved to the unexplored continent of Equinox, and a colony under the name of Isla Nova has been created.
Silencio 'Silence' Freesoul, a colt like many others who was affected by the previous civil war even before he was born, lived a seemingly normal life until one fateful night.
Exiled from his own home, and with no family, Silence decides to delve deeper into the conspiracies surrounding the New Lunar Republic and their colony.