A crossover of the game Freedom Fighters.

When the Bearers of the Elements of Harmony separate to advance further in their lives, a homicide case including the Equestrian Government and the Griffons goes sour, with several attacks on ponies around Equestria. The Bearers of the Elements of Harmony, now separated, are unable to get back together as they are trying their best to protect their own separate towns.

Two brothers, at first wanting to meet an acquaintance, get involved in one of Equestria's greatest wars, as they try to liberate city after city, and at the same time help Princess Celestia regain control over Equestria.